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Publications

Elaine Fuchs, Ph.D.

Rebecca C. Lancefield Professor
Investigator, Howard Hughes Medical Institute

Last five (5) years of published articles are listed below.

Click here for Elaine Fuchs’ full publication list.(opens in new window)

  1. Kudelka MR, Lavin Y, Sun S, Fuchs E. “Molecular and cellular dynamics of squamous cell carcinomas across tissues.” Genes Dev. 2025 Jan 7;39(1-2):18-35. doi: 10.1101/gad.351990.124(opens in new window) (2024).
  2. Stewart KS, Gonzales KA, Yuan S, Tierney MT, Bonny AR, Yang Y, Infarinato NR, Cowley CJ, Levorse JM, Pasolli HA, Ghosh S, Rothlin CV, Fuchs E. “Stem cells tightly regulate dead cell clearance to maintain tissue fitness.” Nature DOI: https://doi.org/10.1038/s41586-024-07855-6(opens in new window)(2024).
  3. Tierney MT, Polak L, Yang Y, Abdusselamoglu MD, Baek I, Stewart KS, Fuchs E. “Vitamin A resolves lineage plasticity to orchestrate stem cell lineage choices.” Science 383(6687)(opens in new window)(2024).
  4. Yuan S, Almagro J, Fuchs E. “Beyond genetics: driving cancer with the tumour microenvironment behind the wheel.” Nat Reviews Cancer DOI: https://doi.org/10.1038/s41568-023-00660-9(opens in new window)(2024).
  5. Yang Y, Gomez N, Infarinato N, Adam RC, Sribour M, Baek I, Laurin M, Fuchs E. “The pioneer factor SOX9 competes for epigenetic factors to switch stem cell fates.” Nat Cell Biol DOI: https://doi.org/10.1038/s41556-023-01184-y (opens in new window)(2023).
  6. Liu S, 1 7, Hur Y-H, Cai X, Cong Q, Yang Y, Xu C, Bilate AM, Gonzales KAU,Parigi SM,Cowley CJ, Hurwitz B, Luo J-D, Tseng T, Gur-Cohen S, Sribour M, Omelchenko T, Levorse J, Pasolli HA, Thompson CB, Mucida D, Fuchs E. “A tissue injury sensing and repair pathway distinct from host pathogen defense.” Cell 186:1-17 DOI: https://doi.org/10.1016/j.cell.2023.03.031 (opens in new window)(2023).
  7. Sajjath S, Gola A, Fuchs E. “Designer bugs as cancer drugs?” Science 380(6641):132-1333 DOI: 10.1126/science.adh3884 (opens in new window)(2023).
  8. Yuan S, Stewart KS, Yang Y, Abdusselamoglu MD, Parigi SM, Feinberg TY, Tumaneng K, Yang H, Levorse JM, Polak L, Ng D, Fuchs E. “Ras drives malignancy through stem cell crosstalk with the microenvironment.” Nature DOI: 10.1038/s41586-022-05475-6(opens in new window) (2022).
  9. Hurwitz B, Guzzi N, Gola A, Fiore VF, Sendoel A, Nikolova M, Barrows D, Carroll TS, Pasolli HA, Fuchs E. “The integrated stress response remodels the microtubule-organizing center to clear unfolded proteins following proteotoxic stress.” Elife 11:e77780 DOI: 10.7554/eLife.77780(opens in new window) (2022).
  10. Naik S, Fuchs E. “Inflammatory memory and tissue adaptation in sickness and in health.” Nature 607(7918):249-255 DOI: 607(7918):249-255(opens in new window) (2022).
  11. Niec RE, Chu T, Schernthanner M, Gur-Cohen S, Hidalgo L, Pasolli HA, Luckett KA, Wang Z, Bhalla SR, Cambuli F, Kataru RP, Ganesh K, Mehrara BJ, Pe’er D, Fuchs E. “Lymphatics act as a signaling hub to regulate intestinal stem cell activity.” Cell Stem Cell 29(7):1067-1082.e18. DOI: 10.1016/j.stem.2022.05.007(opens in new window) (2022).
  12. Niec RE, Rudensky AY, Fuchs E.”Inflammatory adaptation in barrier tissues.” Cell 184(13):3361-3375. DOI: 10.1016/j.cell.2021.05.036(opens in new window) (2021).
  13. Gonzales KAU, Polak L, Matos I, Tierney MT, Gola A, Wong E, Infarinato NR, Nikolova M, Luo S, Liu S, Novak JSS, Lay K, Pasolli HA, Fuchs E. “Stem cells expand potency and alter tissue fitness by accumulating diverse epigenetic memories.” Science 374(6571). DOI: 10.1126/science.abh2444(opens in new window) (2021).
  14. Larsen SB, Cowley CJ, Sajjath SM, Barrows D, Yang Y, Carroll TS, Fuchs E. “Establishment, maintenance, and recall of inflammatory memory.” Cell Stem Cell. doi: 10.1016/j.stem.2021.07.001.(opens in new window) (2021).
  15. Infarinato NR, Stewart KS, Yang Y, Gomez NC, Pasolli HA, Hidalgo L, Polak L, Carroll TS, Fuchs E.”BMP signaling: at the gate between activated melanocyte stem cells and differentiation.” Genes Dev DOI: 10.1101/gad.340281.120 [Epub ahead of print](opens in new window) (2020).
  16. Fiore VF, Krajnc M, Quiroz FG, Levorse J, Pasolli HA, Shvartsman SY, Fuchs E.”Mechanics of a multilayer epithelium instruct tumour architecture and function.” Nature DOI: 10.1038/s41586-020-2695-9 [Epub ahead of print](opens in new window) (2020).
  17. Xi L, Carroll T, Matos I, Luo JD, Polak L, Pasolli HA, Brüning JC, Jaffrey SR, Fuchs E. ”m6A RNA methylation impacts fate choices during skin morphogenesis.” eLife DOI: 10.7554/eLife.56980 [Epub ahead of print](opens in new window) (2020).
  18. Baksh SC, Todorova PK, Gur-Cohen S, Hurwitz B, Ge Y, Novak JSS, Tierney MT, Dela Cruz-Racelis J, Fuchs E, Finley LWS. ”Extracellular serine controls epidermal stem cell fate and tumour initiation.” Nat Cell Biol DOI: 10.1038/s41556-020-0525-9 [Epub ahead of print](opens in new window) (2020).
  19. Adam RC, Yang H, Ge Y, Infarinato NR, Gur-Cohen S, Miao Y, Wang P, Zhao Y, Lu CP, Kim JE, Ko JY, Paik SS, Gronostajski RM, Kim J, Krueger JG, Zheng D, Fuchs E. ” NFI transcription factors provide chromatin access to maintain stem cell identity while preventing unintended lineage fate choices.” Nat Cell Biol DOI: 10.1038/s41556-020-0513-0 [Epub ahead of print](opens in new window) (2020).
  20. Matos I, Asare A, Levorse J, Ouspenskaia T, de la Cruz-Racelis J, Schuhmacher LN, Fuchs E. ” Progenitors oppositely polarize WNT activators and inhibitors to orchestrate tissue development.” eLife DOI: 10.7554/eLife.54304(opens in new window) (2020).
  21. Garcia Quiroz, F, Fiore VF, Levorse J, Polak L, Wong E, Pasolli HA, Fuchs E.” Liquid-liquid phase separation drives skin barrier formation.” Science 367(6483)(opens in new window) (2020).
  22. Ge Y, Miao Y, Gur-Cohen S, Gomez N, Yang H, Nikolova M, Polak L, Hu Y, Verma A, Elemento O, Krueger JG, Fuchs E. “The aging skin microenvironment dictates stem cell behavior.” Proc Natl Acad Sci U S A. 117(10):5339-5350(opens in new window) (2020).
  23. Larsen SB, Cowley CJ, Fuchs E.“Epithelial cells: liaisons of immunity.” Curr Opin Immunol 62:45-53. DOI: 10.1016/j.coi.2019.11.004(opens in new window) (2019).
  24. Gur-Cohen S, Yang H, Baksh SC, Miao Y, Levorse L, Kataru RP, Liu X, de la Cruz-Racelis J, Mehrara BJ, Fuchs E. “Stem cell–driven lymphatic remodeling coordinates tissue regeneration.” Science DOI: 10.1126/science.aay4509(opens in new window) (2019).
  25. Laurin M, Gomez NC, Levorse J, Sendoel A, Sribour M, Fuchs EF. “An RNAi screen unravels the complexities of Rho GTPase networks in skin morphogenesis.” eLIFE DOI: 10.7554/eLife.50226(opens in new window) (2019).
  26. Ellis SJ, Gomez NC, Levorse J, Mertz AF, Ge Y, Fuchs E. “Distinct modes of cell competition shape mammalian tissue morphogenesis.” Nature 569(7757):497-502(opens in new window) (2019).

 

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